Bioinformatics Engineer

Bioinformatics Engineer – Immune Repertoire & Transcriptomics Job Summary We are seeking experienced Bioinformatics Engineers with strong expertise in Immune Repertoire and Transcriptomics data processing to build and deploy scalable cloud-native bioinformatics workflows. The role involves developing production-grade pipelines for TCR/BCR sequencing, single-cell RNA-seq, and Bulk RNA-seq datasets, along with downstream analytics and multi-omics integration. Key Responsibilities Design, develop, and deploy scalable bioinformatics pipelines for: TCR/BCR sequencing data Single-cell RNA-seq (scRNA-seq) Bulk RNA-seq workflows Process sequencing datasets from platforms such as 10x Genomics, SMART-seq, Adaptive, and iRepertoire. Build workflows for QC, alignment, pseudo-alignment, normalization, clustering, differential expression, clonotype analysis, diversity metrics, antigen/epitope matching, and pathway enrichment. Develop production-grade, containerized workflows using Docker/Singularity...